|
|
|
| Registros recuperados: 41 | |
|
|
| Le Boucher, Richard; Vandeputte, Marc; Dupont-nivet, M.; Quillet, E.; Ruelle, Francois; Vergnet, Alain; Kaushik, Sadasivam; Allamellou, J. M.; Medale, F.; Chatain, Beatrice. |
| Aquaculture of carnivorous species has strongly relied on fish meal and fish oil for feed formulation; however, greater replacement by terrestrial plant-based products is occurring now. This rapid change in dietary environment has been a major revolution and has to be taken into consideration in breeding programs. The present study analyzes potential consequences of this nutritional tendency for selective breeding by estimating genetic parameters of BW and growth rates estimated by the thermal growth coefficient (TGC) over different periods with extremely different diets. European sea bass (Dicentrarchus labrax L.) from a factorial cross (1,526 fish) between 25 sires and 9 dams were used to estimate heritabilities and genotype by diet interaction. Starting... |
| Tipo: Text |
Palavras-chave: European sea bass; Genetic correlation; Genotype by diet interaction; Genotype by environment interaction; Plant-based diet. |
| Ano: 2013 |
URL: http://archimer.ifremer.fr/doc/00146/25711/26299.pdf |
| |
|
|
| Dupont-nivet, Mathilde; Karahan-nomm, Bilge; Vergnet, Alain; Merdy, Olivier; Haffray, Pierrick; Chavanne, Herve; Chatain, Beatrice; Vandeputte, Marc. |
| Two hundred fifty three full-sib families from 33 males and 23 females of European seabass were produced in a partly factorial mating design. All fish were reared in the same tank for 14 months until reaching mean weight of 35 g. then 7000 of them were individually tagged and weighed, and dispatched to four farms in different locations (France, Israel, Italy and Portugal) representing a wide variety of environmental conditions. Around mean weight of 400 g. 1177 to 1667 fish at each site were weighed. Daily growth coefficient (DGC) was calculated. Pedigrees were successfully redrawn for 99.2% of fish using microsatellite markers. Genetic correlations between sites were high for body weight (>0.80 in all cases but one, i.e., five cases over six), but only... |
| Tipo: Text |
Palavras-chave: Dicentrarchus labrax; Seabass; Growth; Daily growth coefficient; Heritability; G x E interactions; Aquaculture. |
| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00011/12256/9227.pdf |
| |
|
| |
|
|
| Dupont Nivet, M; Vandeputte, Marc; Vergnet, Alain; Merdy, O; Haffray, P; Chavanne, H; Chatain, Beatrice. |
| 253 full-sib families from 33 males and 23 females of European seabass were produced in a partly factorial mating design. All fish were reared in the same tank during 14 months, then 7000 of them were dispatched in four farms to different locations (France, Israel, Italy, Portugal) representing a wide variety of environmental conditions. Around 400 g mean weight, 1177 to 1667 fish in each site were weighed and length was measured. Condition factor (K) was calculated. Pedigrees were redrawn a posteriori using microsatellites markers: parental origin could be retraced for 99.2% of fish. Due to a high incidence of deformities, the useful sample size was reduced to 491-670 fish per site. Maternal effects were small. Using a simple animal model, heritability... |
| Tipo: Text |
Palavras-chave: Microsatellites; GxE interactions; Heritability; Growth; Seabass; Dicentrarchus labrax. |
| Ano: 2008 |
URL: http://archimer.ifremer.fr/doc/2008/publication-4404.pdf |
| |
|
|
| Ferrari, Sebastien; Horri, Khaled; Allal, Francois; Vergnet, Alain; Benhaim, David; Vandeputte, Marc; Chatain, Beatrice; Begout, Marie-laure. |
| To understand the genetic basis of coping style in European seabass, fish from a full factorial mating (10 females x 50 males) were reared in common garden and individually tagged. Individuals coping style was characterized through behavior tests at four different ages, categorizing fish into proactive or reactive: a hypoxia avoidance test (at 255 days post hatching, dph) and 3 risk-taking tests (at 276, 286 and 304 dph). We observed significant heritability of the coping style, higher for the average of risk-taking scores (h2 = 0.45 ± 0.14) than for the hypoxia avoidance test (h2 = 0.19 ± 0.10). The genetic correlations between the three risk-taking scores were very high (rA = 0.96–0.99) showing that although their repeatability was moderately high (rP =... |
| Tipo: Text |
|
| Ano: 2016 |
URL: https://archimer.ifremer.fr/doc/00362/47278/47239.pdf |
| |
|
|
| Hubert, Jean-noel; Allal, Francois; Hervet, Caroline; Ravakarivelo, Monique; Jeney, Zsigmond; Vergnet, Alain; Guyomard, Rene; Vandeputte, Marc. |
| The capacity of organisms to rapidly evolve in response to environmental changes is a key feature of evolution, and studying mutation compensation is a way to evaluate whether alternative routes of evolution are possible or not. Common carps (Cyprinus carpio) carrying a homozygous loss-of-function mutation for the scale cover gene fgfr1a1, causing the 'mirror' reduced scale cover, were introduced in Madagascar a century ago. Here we show that carps in Malagasy natural waters are now predominantly covered with scales, though they still all carry the homozygous mutation. We also reveal that the number of scales in mutated carps is under strong polygenic genetic control, with a heritability of 0.49. As a whole, our results suggest that carps submitted to... |
| Tipo: Text |
Palavras-chave: Evolution; Mutation compensation; Heritability. |
| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00356/46681/46725.pdf |
| |
|
|
| Grima, Laure; Chatain, Beatrice; Ruelle, Francois; Vergnet, Alain; Launay, Amandine; Mambrini, Muriel; Vandeputte, Marc. |
| Selective breeding to improve residual feed intake (RFI) in sea bass (Dicentrarchus labrax) is a major goal that would optimize economic gain while minimizing the environmental impact of production. Due to the difficulty in accurately measuring individual feed intake, no selective breeding program has yet been started. In a previous study, we identified a criterion phenotypically related to RFI variations: the loss of weight during feed deprivation, FD. Moreover, an additional composite criterion (CC) integrating both FD and weight gain during subsequent re-feeding (RF) was closely related to RFI, even though the relationship was only close to significance (P=0.06). The aim of the present study was to estimate the heritability of these two traits, in order... |
| Tipo: Text |
Palavras-chave: European sea bass; Dicentrarchus labrax; Feed efficiency; Heritability; Genetic parameters; Residual feed intake; Feed deprivation; Compensatory growth; Selective breeding. |
| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00004/11529/8213.pdf |
| |
|
|
| Grima, Laure; Vandeputte, Marc; Ruelle, Francois; Vergnet, Alain; Mambrini, Muriel; Chatain, Beatrice. |
| No commercial breeding programs have yet started to improve feed utilization efficiency in fish, mainly because of the difficulty in accurately measuring individual feed intake in fish reared in groups. Our general goal is to propose indirect criteria to be used for breeding of commercial lines. In a previous study undertaken with rainbow trout clones, a genetic correlation was detected between residual feed intake (RFI), and body weight variation during successive periods of feed deprivation (FD) and re-feeding (RF). To assess the pertinence of such indirect criteria for future breeding programs, we set up a large experiment using sea bass (Dicentrachus labrax), a recently domesticated species with broad genetic diversity. The objectives of the present... |
| Tipo: Text |
Palavras-chave: European sea bass; Dicentrachus labrax; Feed efficiency; Residual feed intake; Feed deprivation; Compensatory growth; Selective breeding. |
| Ano: 2010 |
URL: http://archimer.ifremer.fr/doc/00002/11297/7838.pdf |
| |
|
|
| Vandeputte, Marc; Puledda, Antonio; Tyran, Anne Sophie; Bestin, Anastasia; Coulombet, Celine; Bajek, Aline; Baldit, Gwenaelle; Vergnet, Alain; Allal, Francois; Bugeon, Jerome; Haffray, Pierrick. |
| Genetic parameters for carcass and fillet percentage were estimated in 760 European sea bass reared under commercial conditions and slaughtered at 573 days post fertilization (395 g mean body weight). Phenotyped fish were the offspring of 45 sires and 20 dams crossed in a factorial mating design. Pedigrees were re-constructed with 90.7% success using 12 microsatellites. The heritability of fillet yield was moderately low (0.21), while it was high for carcass yield (0.57). Both traits were poorly correlated (− 0.01 to 0.28) making space for their combined improvement. We investigated different predictors derived from measurement of surfaces on digital pictures and ultrasound measurements at several points of the body. The accuracy of the phenotypic... |
| Tipo: Text |
Palavras-chave: Ultrasound tomography; Genetics; Heritability; Indirect selection; Processing yields. |
| Ano: 2017 |
URL: http://archimer.ifremer.fr/doc/00361/47217/47173.pdf |
| |
|
| |
|
| |
|
|
| Prchal, Martin; Kocour, Martin; Vandeputte, Marc; Kause, Antti; Vergnet, Alain; Zhao, Jinfeng; Gela, David; Kašpar, Vojtěch; Genestout, Lucie; Bestin, Anastasia; Haffray, Pierrick; Bugeon, Jérôme. |
| Slaughter yields are traits of high interest especially for fish species sold in processed form like headless carcass or fillets, as well as with regard to increasing consumer preference for easy-to-prepare fish products. However, slaughter yields cannot be measured on live fish and thus their genetic improvement through mass selection is impossible. The usual alternatives are sib selection and/or indirect selection on correlated traits or morphological predictors of slaughter yields. In the present study, we assessed the possibility of using a combination of 3D digitized landmarks and ultrasound measurements in genetic improvement of slaughter yields in common carp. DNA – pedigreed market-size carp (n = 1553 fish) were produced from a partial factorial... |
| Tipo: Text |
Palavras-chave: Fillet yields; 3D predictors; Genetic parameters; Indirect selection; Breeding program. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00604/71625/70070.pdf |
| |
|
|
| Vandeputte, Marc; Garouste, Romain; Dupont-nivet, Mathilde; Haffray, Pierrick; Vergnet, Alain; Chavanne, Herve; Laureau, Stanislas; Ron, Tetsuzan Benny; Pagelson, Glen; Mazorra, Carlos; Ricoux, Remi; Marques, Pedro; Gameiro, Marta; Chatain, Beatrice. |
| Sea bass is a major species in Mediterranean aquaculture, but has a distribution area ranging from North Atlantic to South Mediterranean, with a population structure previously revealed by population genetics. To test the farming performances of wild sea bass populations, we produced a partial diallel cross mating scheme, using sires originating from North Atlantic (NAT), South Atlantic (SAT), West Mediterranean (WEM), North-East Mediterranean (NEM) and South-East Mediterranean (SEM). Fifteen sires per origin were mated in a full-factorial design using artificial fertilization with 9 NAT dams and 17 WEM dams, producing 10 population crosses and 1950 potential full-sib families. All fish were reared together, then tagged at an average weight of 20 g and... |
| Tipo: Text |
Palavras-chave: European sea bass; Dicentrarchus labrax; Selective breeding; Growth; Processing yields; Genotype by environment interaction. |
| Ano: 2014 |
URL: http://archimer.ifremer.fr/doc/00171/28265/26514.pdf |
| |
|
|
| Rodde, Charles; Vandeputte, Marc; Allal, Francois; Besson, Mathieu; Clota, Frederic; Vergnet, Alain; Benzie, John A. H.; De Verdal, Hugues. |
| Using breeding programs to improve feed efficiency, the ratio between fish body weight gain (BWG) and feed intake (FI), could increase aquaculture sustainability through reduced feed costs and environmental impact. To this end, individual phenotypic information is required. Individual FI can be measured by isolating each fish. Under these conditions, restricting the feeding rate has proved relevant to improve feed efficiency indirectly by selecting faster-growing animals. Moreover, a restricted feeding rate reduces the work load of collecting uneaten pellets after each meal. The approach assumes the most efficient fish at high and low feeding rates are the same, but this assumption remains untested. In European sea bass (Dicentrarchus labrax), feed... |
| Tipo: Text |
Palavras-chave: Aquaculture; Individual rearing; Feed efficiency; Feeding rate; Fasting tolerance; Sea bass. |
| Ano: 2020 |
URL: https://archimer.ifremer.fr/doc/00654/76614/77767.pdf |
| |
|
|
| Prchal, Martin; Bugeon, Jerome; Vandeputte, Marc; Kause, Antti; Vergnet, Alain; Zhao, Jinfeng; Gela, David; Genestout, Lucie; Bestin, Anastasia; Haffray, Pierrick; Kocour, Martin. |
| Common carp is a major aquaculture species worldwide, commonly sold alive but also as processed headless carcass or filets. However, recording of processing yields is impossible on live breeding candidates, and alternatives for genetic improvement are either sib selection based on slaughtered fish, or indirect selection on correlated traits recorded in vivo. Morphological predictors that can be measured on live fish and that correlate with real slaughter yields hence remain a possible alternative. To quantify the power of morphological predictors for genetic improvement of yields, we estimated genetic parameters of slaughter yields and various predictors in 3-year-old common carp reared communally under semi-intensive pond conditions. The experimental... |
| Tipo: Text |
Palavras-chave: Heritability estimates; Genetic correlations; Indirect selection; Morphological landmarks; Slaughter yields; Ultrasound imagery. |
| Ano: 2018 |
URL: http://archimer.ifremer.fr/doc/00451/56242/57806.pdf |
| |
|
|
| Vandeputte, Marc; Labbe, Catherine; Suquet, Marc; Fauvel, Christian; Goardon, Lionel; Duclos, Delphine; Danchin-burge, Coralie; Vergnet, Alain; Rault, Paul; Degremont, Lionel; Benabdelmouna, Abdellah; Brizard, Raphael; Haffray, Pierrick. |
| Tipo: Text |
|
| Ano: 2012 |
URL: http://archimer.ifremer.fr/doc/00098/20975/18597.pdf |
| |
|
|
| Vandeputte, Marc; Porte, J. D.; Auperin, B.; Dupont-nivet, M.; Vergnet, Alain; Valotaire, C.; Claireaux, Guy; Prunet, P.; Chatain, Beatrice. |
| Sea bass is a major species in Mediterranean aquaculture, and is now being subject to selective breeding programs for faster growth. In terrestrial species, it was demonstrated that fast growth may be linked to a correlated degradation of fitness traits. In this experiment, we evaluated 600 young sea bass from a factorial mating of 76 sires and 13 dams. The sires were from four genetic groups, wild (W), domesticated (D), and selected for growth (2 groups, M and P). The 600 offspring were submitted to two acute confinement stress challenges at 6 weeks intervals, and plasma cortisol at one hour post stress was measured. The same fish were also submitted to two swimming challenges at a 5 days interval, where the maximum sustained swimming speed (Umax) of each... |
| Tipo: Text |
Palavras-chave: Aquaculture; Selective breeding; Stress response; Maximum sustained swimming speed; Heritability; Correlated response. |
| Ano: 2016 |
URL: https://archimer.ifremer.fr/doc/00308/41955/41218.pdf |
| |
|
|
| Vandeputte, Marc; Dupont Nivet, M; Haffray, P; Chavanne, H; Cenadelli, S; Parati, K; Vidal, Marie-odile; Vergnet, Alain; Chatain, Beatrice. |
| Selective breeding of European sea bass (Dicentrarchus labrax) receives a growing interest, as the estimated heritability of growth is medium to high. In this study, we compared the offspring of four groups of sea bass sires, mated with the same wild dams: wild (W), first generation of domestication (D), first generation of mass selection for length (M), first generation of PROSPER-like selection for length (P). The comparison was done both in replicated tanks (separate rearing) and in mixed tanks (mixed rearing) where sire origins were recovered by genotyping of eight microsatellite markers. Weight, length and growth rate were measured from day 238 post-fertilization (69 g mean weight) to day 611 post-fertilization (390 g mean weight). Both in mixed and... |
| Tipo: Text |
Palavras-chave: Nephrocalcinosis; Competition; Microsatellites; Parentage assignment; Realized heritability; Selection response; Growth; Selective breeding; Dicentrarchus labrax; European sea bass. |
| Ano: 2009 |
URL: http://archimer.ifremer.fr/doc/2009/publication-5303.pdf |
| |
|
|
| Faggion, Sara; Vandeputte, Marc; Vergnet, Alain; Clota, Frederic; Blanc, Marie-odile; Sanchez, Pierre; Ruelle, Francois; Allal, Francois; Wang, Hanping. |
| The European sea bass (Dicentrarchus labrax) exhibits female-biased sexual size dimorphism (SSD) early in development. New tagging techniques provide the opportunity to monitor individual sex-related growth during the post-larval and juvenile stages. We produced an experimental population through artificial fertilization and followed a rearing-temperature protocol (~16°C from hatching to 112 days post-hatching, dph; ~20°C from 117 to 358 dph) targeting a roughly balanced sex ratio. The fish were tagged with microchips between 61 and 96 dph in five tagging trials of 50 fish each; individual standard length (SL) was recorded through repeated biometric measurements performed between 83 to 110 dph via image analyses. Body weight (BW) was modelled using the... |
| Tipo: Text |
|
| Ano: 2021 |
URL: https://archimer.ifremer.fr/doc/00691/80288/83391.pdf |
| |
|
|
| Ferrari, Sebastien; Leguay, Didier; Vergnet, Alain; Vidal, Marie-odile; Chatain, Beatrice; Begout, Marie-laure. |
| Biological variability is no longer considered as statistical noise, but rather as an adaptive benefit. This variability comes from consistent differences in behavioral and physiological responses among individuals to a changing/challenging environment, named “coping style”, “temperament” or “personality”. Many studies have described how to characterize personality traits and how to assess their consistency over time and between different contexts; however, little is known about the environmental factors shaping personality development. Because contrasting personalities are maintained with evolution, this lead to the widespread assumption that genes play a predominant role in personality. In many cases, personality traits are however also likely to be... |
| Tipo: Text |
|
| Ano: 2016 |
URL: http://archimer.ifremer.fr/doc/00333/44433/44100.pdf |
| |
| Registros recuperados: 41 | |
|
|
|
